IL_8IFE_116

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GUCAAAGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|1A|G|3714
8IFE|1|1A|U|3715
8IFE|1|1A|C|3716
8IFE|1|1A|A|3717
8IFE|1|1A|A|3718
8IFE|1|1A|A|3719
8IFE|1|1A|G|3720
8IFE|1|1A|U|3721
*
8IFE|1|1A|A|3732
8IFE|1|1A|A|3733
8IFE|1|1A|U|3734
8IFE|1|1A|G|3735
8IFE|1|1A|A|3736
8IFE|1|1A|A|3737
8IFE|1|1A|G|3738
8IFE|1|1A|C|3739

Current chains

Chain 1A

28S ribosomal RNA

Nearby chains

Chain 1D

60S ribosomal protein L8

Chain 2c

60S ribosomal protein L36