IL_8IFE_154
3D structure
- PDB id
- 8IFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Arbekacin-added human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.57 Å
Loop
- Sequence
- GCCUCGGAUAGC*GUGCGGAGUGC
- Length
- 23 nucleotides
- Bulged bases
- 8IFE|1|1A|C|4756, 8IFE|1|1A|C|4757, 8IFE|1|1A|U|4763, 8IFE|1|1A|C|4871, 8IFE|1|1A|A|4874, 8IFE|1|1A|G|4877
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IFE|1|1A|G|4755
8IFE|1|1A|C|4756
8IFE|1|1A|C|4757
8IFE|1|1A|U|4758
8IFE|1|1A|C|4759
8IFE|1|1A|G|4760
8IFE|1|1A|G|4761
8IFE|1|1A|A|4762
8IFE|1|1A|U|4763
8IFE|1|1A|A|4764
8IFE|1|1A|G|4765
8IFE|1|1A|C|4766
*
8IFE|1|1A|G|4868
8IFE|1|1A|U|4869
8IFE|1|1A|G|4870
8IFE|1|1A|C|4871
8IFE|1|1A|G|4872
8IFE|1|1A|G|4873
8IFE|1|1A|A|4874
8IFE|1|1A|G|4875
8IFE|1|1A|U|4876
8IFE|1|1A|G|4877
8IFE|1|1A|C|4878
Current chains
- Chain 1A
- 28S ribosomal RNA
Nearby chains
- Chain 1H
- 60S ribosomal protein L6
- Chain 2C
- 60S ribosomal protein L9
- Chain 2G
- 60S ribosomal protein L14
- Chain 2I
- 60S ribosomal protein L13a
- Chain 2M
- 60S ribosomal protein L18a
Coloring options: