IL_8IFE_162

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

8IFE|1|1A|C|5013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|1A|G|5012
8IFE|1|1A|C|5013
8IFE|1|1A|A|5014
8IFE|1|1A|G|5015
8IFE|1|1A|A|5016
8IFE|1|1A|G|5017
*
8IFE|1|1A|C|5032
8IFE|1|1A|G|5033
8IFE|1|1A|A|5034
8IFE|1|1A|U|5035
8IFE|1|1A|C|5036

Current chains

Chain 1A

28S ribosomal RNA

Nearby chains

Chain 2L

60S ribosomal protein L19

Chain 2Q

60S ribosomal protein L24

Chain 2t

40S ribosomal protein S8