IL_8IFE_190
3D structure
- PDB id
- 8IFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Arbekacin-added human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.57 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 8IFE|1|2m|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IFE_190 not in the Motif Atlas
- Homologous match to IL_8C3A_412
- Geometric discrepancy: 0.0906
- The information below is about IL_8C3A_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49054.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8IFE|1|2m|G|411
8IFE|1|2m|G|412
8IFE|1|2m|G|413
*
8IFE|1|2m|C|424
8IFE|1|2m|G|425
8IFE|1|2m|A|426
8IFE|1|2m|U|427
8IFE|1|2m|U|428
8IFE|1|2m|C|429
Current chains
- Chain 2m
- 18S ribosomal RNA
Nearby chains
- Chain 2q
- 40S ribosomal protein S4, X isoform
- Chain 3B
- 40S ribosomal protein S23
- Chain 3I
- 40S ribosomal protein S9
Coloring options: