IL_8IFE_197

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

UACAG*CCUGUA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|2m|U|530
8IFE|1|2m|A|531
8IFE|1|2m|C|532
8IFE|1|2m|A|533
8IFE|1|2m|G|534
*
8IFE|1|2m|C|549
8IFE|1|2m|C|550
8IFE|1|2m|U|551
8IFE|1|2m|G|552
8IFE|1|2m|U|553
8IFE|1|2m|A|554

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 3I

40S ribosomal protein S9

Chain 3Q

40S ribosomal protein S30