IL_8IFE_211

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

CGGUUC*GGAACUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|2m|C|879
8IFE|1|2m|G|880
8IFE|1|2m|G|881
8IFE|1|2m|U|882
8IFE|1|2m|U|883
8IFE|1|2m|C|884
*
8IFE|1|2m|G|901
8IFE|1|2m|G|902
8IFE|1|2m|A|903
8IFE|1|2m|A|904
8IFE|1|2m|C|905
8IFE|1|2m|U|906
8IFE|1|2m|G|907

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 2L

60S ribosomal protein L19

Chain 2v

40S ribosomal protein S11