IL_8IFE_269

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GAAACGG*CCUCGCC

Length

14 nucleotides

Bulged bases

8IFE|1|1A|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|1A|G|4891
8IFE|1|1A|A|4892
8IFE|1|1A|A|4893
8IFE|1|1A|A|4894
8IFE|1|1A|C|4895
8IFE|1|1A|G|4896
8IFE|1|1A|G|4897
*
8IFE|1|1A|C|4923
8IFE|1|1A|C|4924
8IFE|1|1A|U|4925
8IFE|1|1A|C|4926
8IFE|1|1A|G|4927
8IFE|1|1A|C|4928
8IFE|1|1A|C|4929

Current chains

Chain 1A

28S ribosomal RNA

Nearby chains

Chain 1H

60S ribosomal protein L6

Chain 2G

60S ribosomal protein L14

Chain 2I

60S ribosomal protein L13a