IL_8INE_046
3D structure
- PDB id
- 8INE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State G'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGC*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CGC,GCG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INE_046 not in the Motif Atlas
- Geometric match to IL_4M4O_001
- Geometric discrepancy: 0.1802
- The information below is about IL_4M4O_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
8INE|1|2|C|1097
8INE|1|2|G|1098
8INE|1|2|C|1099
*
8INE|1|2|G|1196
8INE|1|2|C|1197
8INE|1|2|G|1198
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain R
- Translation machinery-associated protein 16
- Chain b
- 60S ribosomal protein L18a
- Chain c
- 60S ribosomal protein L21
Coloring options: