IL_8INE_130
3D structure
- PDB id
- 8INE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State G'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 43 nucleotides
- Bulged bases
- 8INE|1|2|G|4099, 8INE|1|2|G|4104, 8INE|1|2|C|4116, 8INE|1|2|U|4117, 8INE|1|2|U|4118, 8INE|1|2|G|4121, 8INE|1|2|C|4125, 8INE|1|2|C|4126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8INE|1|2|G|4091
8INE|1|2|G|4092
8INE|1|2|G|4093
8INE|1|2|G|4094
8INE|1|2|G|4095
8INE|1|2|C|4096
8INE|1|2|G|4097
8INE|1|2|A|4098
8INE|1|2|G|4099
8INE|1|2|C|4100
8INE|1|2|C|4101
8INE|1|2|C|4102
8INE|1|2|C|4103
8INE|1|2|G|4104
8INE|1|2|A|4105
8INE|1|2|G|4106
8INE|1|2|G|4107
8INE|1|2|G|4108
8INE|1|2|G|4109
8INE|1|2|C|4110
8INE|1|2|U|4111
8INE|1|2|C|4112
8INE|1|2|U|4113
8INE|1|2|C|4114
8INE|1|2|G|4115
8INE|1|2|C|4116
8INE|1|2|U|4117
8INE|1|2|U|4118
8INE|1|2|C|4119
8INE|1|2|U|4120
8INE|1|2|G|4121
8INE|1|2|G|4122
8INE|1|2|C|4123
8INE|1|2|G|4124
8INE|1|2|C|4125
8INE|1|2|C|4126
8INE|1|2|A|4127
8INE|1|2|A|4128
8INE|1|2|G|4129
*
8INE|1|2|C|4155
8INE|1|2|G|4156
8INE|1|2|A|4157
8INE|1|2|C|4158
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L30
- Chain F
- 60S ribosomal protein L34
- Chain G
- 60S ribosomal protein L7a
- Chain X
- 60S ribosomal protein L37a
- Chain i
- 60S ribosomal protein L27
- Chain m
- 60S ribosomal protein L8
- Chain w
- Ribosome biogenesis protein NOP53
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