IL_8INF_011

3D structure

PDB id

8INF (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F'

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

8INF|1|2|G|188, 8INF|1|2|G|254

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INF|1|2|C|180
8INF|1|2|C|181
8INF|1|2|G|182
8INF|1|2|C|183
8INF|1|2|U|184
8INF|1|2|C|185
8INF|1|2|G|186
8INF|1|2|U|187
8INF|1|2|G|188
8INF|1|2|G|189
*
8INF|1|2|C|252
8INF|1|2|G|253
8INF|1|2|G|254
8INF|1|2|C|255
8INF|1|2|G|256

Current chains

Chain 2

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L35

Chain M

60S ribosomal protein L37

Chain Q

60S ribosomal protein L13

Chain h

60S ribosomal protein L26