IL_8INF_123
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAG*UCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_123 not in the Motif Atlas
- Geometric match to IL_4YHW_001
- Geometric discrepancy: 0.1748
- The information below is about IL_4YHW_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
8INF|1|2|G|3755
8INF|1|2|A|3756
8INF|1|2|G|3757
*
8INF|1|2|U|3768
8INF|1|2|C|3769
8INF|1|2|U|3770
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain A
- G Protein Nucleolar 2
- Chain f
- Protein SDA1 homolog
Coloring options: