3D structure

PDB id
8INF (explore in PDB, NAKB, or RNA 3D Hub)
Description
human nuclear pre-60S ribosomal particle - State F'
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UUG*CCAAG
Length
8 nucleotides
Bulged bases
8INF|1|2|A|4488
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8INF|1|2|U|4468
8INF|1|2|U|4469
8INF|1|2|G|4470
*
8INF|1|2|C|4485
8INF|1|2|C|4486
8INF|1|2|A|4487
8INF|1|2|A|4488
8INF|1|2|G|4489

Current chains

Chain 2
28S rRNA

Nearby chains

Chain 4
GTP-binding protein 4
Chain I
60S ribosomal protein L9
Chain T
Leydig cell tumor 10 kDa protein homolog
Chain V
60S ribosomal protein L13a
Chain s
Ribosome biogenesis protein NSA2 homolog
Chain z
Protein LLP homolog

Coloring options:

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