IL_8INF_145
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_145 not in the Motif Atlas
- Geometric match to IL_5J7L_042
- Geometric discrepancy: 0.329
- The information below is about IL_5J7L_042
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_51454.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 45
Unit IDs
8INF|1|2|C|4537
8INF|1|2|G|4538
*
8INF|1|2|C|4547
8INF|1|2|A|4548
8INF|1|2|G|4549
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain A
- G Protein Nucleolar 2
- Chain f
- Protein SDA1 homolog
- Chain m
- 60S ribosomal protein L8
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