IL_8INF_165
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CG*UCG
- Length
- 5 nucleotides
- Bulged bases
- 8INF|1|2|C|5054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_165 not in the Motif Atlas
- Geometric match to IL_1KUQ_002
- Geometric discrepancy: 0.3775
- The information below is about IL_1KUQ_002
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
8INF|1|2|C|4996
8INF|1|2|G|4997
*
8INF|1|2|U|5053
8INF|1|2|C|5054
8INF|1|2|G|5055
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain j
- 60S ribosomal protein L31
Coloring options: