IL_8INK_024

3D structure

PDB id

8INK (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State D

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGUCGGCG*CCCCGACC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INK|1|2|G|491
8INK|1|2|U|492
8INK|1|2|G|493
8INK|1|2|U|494
8INK|1|2|C|495
8INK|1|2|G|496
8INK|1|2|G|497
8INK|1|2|C|498
8INK|1|2|G|499
*
8INK|1|2|C|655
8INK|1|2|C|656
8INK|1|2|C|657
8INK|1|2|C|658
8INK|1|2|G|659
8INK|1|2|A|660
8INK|1|2|C|661
8INK|1|2|C|662

Current chains

Chain 2

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L4

Chain Z

60S ribosomal protein L18