IL_8IPD_024

3D structure

PDB id

8IPD (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGUCGGCG*CCCCGACC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IPD|1|2|G|491
8IPD|1|2|U|492
8IPD|1|2|G|493
8IPD|1|2|U|494
8IPD|1|2|C|495
8IPD|1|2|G|496
8IPD|1|2|G|497
8IPD|1|2|C|498
8IPD|1|2|G|499
*
8IPD|1|2|C|655
8IPD|1|2|C|656
8IPD|1|2|C|657
8IPD|1|2|C|658
8IPD|1|2|G|659
8IPD|1|2|A|660
8IPD|1|2|C|661
8IPD|1|2|C|662

Current chains

Chain 2

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L4

Chain Z

60S ribosomal protein L18