IL_8IPD_109

3D structure

PDB id

8IPD (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

8IPD|1|2|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IPD|1|2|G|2901
8IPD|1|2|G|2902
8IPD|1|2|G|2903
8IPD|1|2|U|2904
8IPD|1|2|C|2905
*
8IPD|1|2|G|3589
8IPD|1|2|G|3590
8IPD|1|2|C|3591
8IPD|1|2|G|3592
8IPD|1|2|C|3593
8IPD|1|2|C|3594
8IPD|1|2|U|3595
8IPD|1|2|A|3596
8IPD|1|2|G|3597
8IPD|1|2|C|3598

Current chains

Chain 2

28S rRNA

Nearby chains

Chain a

60S ribosomal protein L19