IL_8IPY_092
3D structure
- PDB id
- 8IPY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State D'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GG*CUC
- Length
- 5 nucleotides
- Bulged bases
- 8IPY|1|2|U|2769
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IPY_092 not in the Motif Atlas
- Geometric match to IL_2R8S_004
- Geometric discrepancy: 0.2502
- The information below is about IL_2R8S_004
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 129
Unit IDs
8IPY|1|2|G|2549
8IPY|1|2|G|2550
*
8IPY|1|2|C|2768
8IPY|1|2|U|2769
8IPY|1|2|C|2770
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L34
- Chain O
- 60S ribosomal protein L38
- Chain f
- Ribosome biogenesis protein NOP53
- Chain q
- Pescadillo homolog
Coloring options: