IL_8IR1_025

3D structure

PDB id

8IR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGUCGGCG*CCCCGACC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR1|1|2|G|491
8IR1|1|2|U|492
8IR1|1|2|G|493
8IR1|1|2|U|494
8IR1|1|2|C|495
8IR1|1|2|G|496
8IR1|1|2|G|497
8IR1|1|2|C|498
8IR1|1|2|G|499
*
8IR1|1|2|C|655
8IR1|1|2|C|656
8IR1|1|2|C|657
8IR1|1|2|C|658
8IR1|1|2|G|659
8IR1|1|2|A|660
8IR1|1|2|C|661
8IR1|1|2|C|662

Current chains

Chain 2

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L4