3D structure

PDB id
8IR1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human nuclear pre-60S ribosomal particle - State A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GGCGGACU*AGUGCGCC
Length
16 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8IR1|1|2|G|1170
8IR1|1|2|G|1171
8IR1|1|2|C|1172
8IR1|1|2|G|1173
8IR1|1|2|G|1174
8IR1|1|2|A|1175
8IR1|1|2|C|1176
8IR1|1|2|U|1177
*
8IR1|1|2|A|1184
8IR1|1|2|G|1185
8IR1|1|2|U|1186
8IR1|1|2|G|1187
8IR1|1|2|C|1188
8IR1|1|2|G|1189
8IR1|1|2|C|1190
8IR1|1|2|C|1191

Current chains

Chain 2
28S rRNA

Nearby chains

Chain A
60S ribosomal protein L11

Coloring options:

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