IL_8IR1_165
3D structure
- PDB id
- 8IR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IR1_165 not in the Motif Atlas
- Geometric match to IL_5TBW_034
- Geometric discrepancy: 0.2216
- The information below is about IL_5TBW_034
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8IR1|1|W|U|79
8IR1|1|W|U|80
8IR1|1|W|G|81
*
8IR1|1|W|C|95
8IR1|1|W|U|96
8IR1|1|W|G|97
Current chains
- Chain W
- 5S RNA
Nearby chains
- Chain T
- Ribosome production factor 2 homolog
Coloring options: