IL_8IR1_167

3D structure

PDB id

8IR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUUCCCG*CGGGGG

Length

14 nucleotides

Bulged bases

8IR1|1|2|U|513, 8IR1|1|2|U|514, 8IR1|1|2|C|515, 8IR1|1|2|C|517

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR1|1|2|C|511
8IR1|1|2|U|512
8IR1|1|2|U|513
8IR1|1|2|U|514
8IR1|1|2|C|515
8IR1|1|2|C|516
8IR1|1|2|C|517
8IR1|1|2|G|518
*
8IR1|1|2|C|643
8IR1|1|2|G|644
8IR1|1|2|G|645
8IR1|1|2|G|646
8IR1|1|2|G|647
8IR1|1|2|G|648

Current chains

Chain 2

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L27a

Chain Q

60S ribosomal protein L13