IL_8IR3_010

3D structure

PDB id

8IR3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State B'

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

8IR3|1|2|G|186, 8IR3|1|2|G|188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR3|1|2|C|180
8IR3|1|2|C|181
8IR3|1|2|G|182
8IR3|1|2|C|183
8IR3|1|2|U|184
8IR3|1|2|C|185
8IR3|1|2|G|186
8IR3|1|2|U|187
8IR3|1|2|G|188
8IR3|1|2|G|189
*
8IR3|1|2|C|252
8IR3|1|2|G|253
8IR3|1|2|G|254
8IR3|1|2|C|255
8IR3|1|2|G|256

Current chains

Chain 2

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L35

Chain M

60S ribosomal protein L37

Chain Q

60S ribosomal protein L13