IL_8IR3_021

3D structure

PDB id

8IR3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State B'

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8IR3|1|2|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR3|1|2|A|466
8IR3|1|2|U|467
8IR3|1|2|U|468
8IR3|1|2|C|469
8IR3|1|2|A|470
8IR3|1|2|A|471
8IR3|1|2|C|472
*
8IR3|1|2|G|682
8IR3|1|2|C|683
8IR3|1|2|G|684
8IR3|1|2|C|685
8IR3|1|2|A|686
8IR3|1|2|U|687
8IR3|1|2|U|688
8IR3|1|2|U|689

Current chains

Chain 2

28S rRNA

Nearby chains

Chain l

60S ribosomal protein L28

Chain o

60S ribosomal protein L6