IL_8IR3_110

3D structure

PDB id

8IR3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State B'

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

8IR3|1|2|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR3|1|2|G|2901
8IR3|1|2|G|2902
8IR3|1|2|G|2903
8IR3|1|2|U|2904
8IR3|1|2|C|2905
*
8IR3|1|2|G|3589
8IR3|1|2|G|3590
8IR3|1|2|C|3591
8IR3|1|2|G|3592
8IR3|1|2|C|3593
8IR3|1|2|C|3594
8IR3|1|2|U|3595
8IR3|1|2|A|3596
8IR3|1|2|G|3597
8IR3|1|2|C|3598

Current chains

Chain 2

28S rRNA

Nearby chains

Chain a

60S ribosomal protein L19

Chain f

Ribosome biogenesis protein NOP53