IL_8JDK_228

3D structure

PDB id

8JDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.26 Å

Loop

Sequence

CGGUUC*GAACUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JDK|1|w|C|879
8JDK|1|w|G|880
8JDK|1|w|G|881
8JDK|1|w|U|882
8JDK|1|w|U|883
8JDK|1|w|C|884
*
8JDK|1|w|G|902
8JDK|1|w|A|903
8JDK|1|w|A|904
8JDK|1|w|C|905
8JDK|1|w|U|906
8JDK|1|w|G|907

Current chains

Chain w

18S ribosomal RNA

Nearby chains

Chain 8

40S ribosomal protein S11

Chain W

60S ribosomal protein L19