IL_8JDL_319
3D structure
- PDB id
- 8JDL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- UUGAAAAAA(PSU)(PSU)*ACCGCAGCUA
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8JDL|1|w|U|805
8JDL|1|w|U|806
8JDL|1|w|G|807
8JDL|1|w|A|808
8JDL|1|w|A|809
8JDL|1|w|A|810
8JDL|1|w|A|811
8JDL|1|w|A|812
8JDL|1|w|A|813
8JDL|1|w|PSU|814
8JDL|1|w|PSU|815
*
8JDL|1|w|A|849
8JDL|1|w|C|850
8JDL|1|w|C|851
8JDL|1|w|G|852
8JDL|1|w|C|853
8JDL|1|w|A|854
8JDL|1|w|G|855
8JDL|1|w|C|856
8JDL|1|w|U|857
8JDL|1|w|A|858
Current chains
- Chain w
- 18S ribosomal RNA
Nearby chains
- Chain 1
- 40S ribosomal protein S4, X isoform
- Chain 4
- 40S ribosomal protein S7
- Chain 6
- 40S ribosomal protein S9
- Chain 8
- 40S ribosomal protein S11
- Chain AI
- 40S ribosomal protein S15a
Coloring options: