IL_8JDM_066
3D structure
- PDB id
- 8JDM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CUCGCAGACCCGACCCGCCACG*CG
- Length
- 24 nucleotides
- Bulged bases
- 8JDM|1|D|C|1707
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8JDM|1|D|C|1694
8JDM|1|D|U|1695
8JDM|1|D|C|1696
8JDM|1|D|G|1697
8JDM|1|D|C|1698
8JDM|1|D|A|1699
8JDM|1|D|G|1700
8JDM|1|D|A|1701
8JDM|1|D|C|1702
8JDM|1|D|C|1703
8JDM|1|D|C|1704
8JDM|1|D|G|1705
8JDM|1|D|A|1706
8JDM|1|D|C|1707
8JDM|1|D|C|1714
8JDM|1|D|C|1715
8JDM|1|D|G|1716
8JDM|1|D|C|1717
8JDM|1|D|C|1718
8JDM|1|D|A|1719
8JDM|1|D|C|1720
8JDM|1|D|G|1721
*
8JDM|1|D|C|1841
8JDM|1|D|G|1842
Current chains
- Chain D
- 28S ribosomal RNA
Nearby chains
- Chain I
- 60S ribosomal protein L4
- Chain L
- 60S ribosomal protein L7
- Chain V
- 60S ribosomal protein L18
- Chain Y
- 60S ribosomal protein L21
- Chain g
- 60S ribosomal protein L29
Coloring options: