IL_8JSH_067

3D structure

PDB id

8JSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-body-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CAUGGGAGUGGGUUGCAAAAGAAG*CCACUUUGUGAUUCAUGACUGGG

Length

47 nucleotides

Bulged bases

8JSH|1|g|G|1432, 8JSH|1|g|A|1468, 8JSH|1|g|C|1469

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSH|1|g|C|1412
8JSH|1|g|A|1413
8JSH|1|g|U|1414
8JSH|1|g|G|1415
8JSH|1|g|G|1416
8JSH|1|g|G|1417
8JSH|1|g|A|1418
8JSH|1|g|G|1419
8JSH|1|g|U|1420
8JSH|1|g|G|1421
8JSH|1|g|G|1422
8JSH|1|g|G|1423
8JSH|1|g|U|1424
8JSH|1|g|U|1425
8JSH|1|g|G|1426
8JSH|1|g|C|1427
8JSH|1|g|A|1428
8JSH|1|g|A|1429
8JSH|1|g|A|1430
8JSH|1|g|A|1431
8JSH|1|g|G|1432
8JSH|1|g|A|1433
8JSH|1|g|A|1434
8JSH|1|g|G|1435
*
8JSH|1|g|C|1466
8JSH|1|g|C|1467
8JSH|1|g|A|1468
8JSH|1|g|C|1469
8JSH|1|g|U|1470
8JSH|1|g|U|1471
8JSH|1|g|U|1472
8JSH|1|g|G|1473
8JSH|1|g|U|1474
8JSH|1|g|G|1475
8JSH|1|g|A|1476
8JSH|1|g|U|1477
8JSH|1|g|U|1478
8JSH|1|g|C|1479
8JSH|1|g|A|1480
8JSH|1|g|U|1481
8JSH|1|g|G|1482
8JSH|1|g|A|1483
8JSH|1|g|C|1484
8JSH|1|g|U|1485
8JSH|1|g|G|1486
8JSH|1|g|G|1487
8JSH|1|g|G|1488

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain 3

30S ribosomal protein S20

Chain t

Small ribosomal subunit protein uS12