IL_8K2A_070
3D structure
- PDB id
- 8K2A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 55S mitoribosome with Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUUA*UGAACA
- Length
- 11 nucleotides
- Bulged bases
- 8K2A|1|S1|A|400, 8K2A|1|S1|C|401
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8K2A|1|S1|U|299
8K2A|1|S1|U|300
8K2A|1|S1|U|301
8K2A|1|S1|U|302
8K2A|1|S1|A|303
*
8K2A|1|S1|U|397
8K2A|1|S1|G|398
8K2A|1|S1|A|399
8K2A|1|S1|A|400
8K2A|1|S1|C|401
8K2A|1|S1|A|402
Current chains
- Chain S1
- 12S rRNA
Nearby chains
- Chain SL
- Small ribosomal subunit protein uS12m
- Chain SO
- Small ribosomal subunit protein uS15m
- Chain SQ
- Small ribosomal subunit protein uS17m
- Chain Sa
- Small ribosomal subunit protein mS25
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