IL_8K2A_083

3D structure

PDB id

8K2A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

8K2A|1|S1|C|603

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K2A|1|S1|C|597
8K2A|1|S1|U|598
8K2A|1|S1|U|599
8K2A|1|S1|G|600
8K2A|1|S1|C|601
8K2A|1|S1|U|602
8K2A|1|S1|C|603
8K2A|1|S1|A|604
8K2A|1|S1|G|605
*
8K2A|1|S1|C|693
8K2A|1|S1|C|694
8K2A|1|S1|C|695
8K2A|1|S1|A|696
8K2A|1|S1|U|697
8K2A|1|S1|G|698

Current chains

Chain S1

12S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein uS5m

Chain SN

Small ribosomal subunit protein uS14m

Chain Si

Small ribosomal subunit protein mS33