IL_8K2A_100
3D structure
- PDB id
- 8K2A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 55S mitoribosome with Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAAACC*GAUGAAAAAUUAUAACCAAG
- Length
- 27 nucleotides
- Bulged bases
- 8K2A|1|L1|A|134, 8K2A|1|L1|A|138
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8K2A|1|L1|C|2
8K2A|1|L1|U|3
8K2A|1|L1|A|4
8K2A|1|L1|A|5
8K2A|1|L1|A|6
8K2A|1|L1|C|7
8K2A|1|L1|C|8
*
8K2A|1|L1|G|127
8K2A|1|L1|A|128
8K2A|1|L1|U|129
8K2A|1|L1|G|130
8K2A|1|L1|A|131
8K2A|1|L1|A|132
8K2A|1|L1|A|133
8K2A|1|L1|A|134
8K2A|1|L1|A|135
8K2A|1|L1|U|136
8K2A|1|L1|U|137
8K2A|1|L1|A|138
8K2A|1|L1|U|139
8K2A|1|L1|A|140
8K2A|1|L1|A|141
8K2A|1|L1|C|142
8K2A|1|L1|C|143
8K2A|1|L1|A|144
8K2A|1|L1|A|145
8K2A|1|L1|G|146
Current chains
- Chain L1
- 16S rRNA
Nearby chains
- Chain LT
- Large ribosomal subunit protein bL20m
- Chain LV
- 39S ribosomal protein L22, mitochondrial
- Chain LW
- Large ribosomal subunit protein uL23m
- Chain LX
- Large ribosomal subunit protein uL24m
- Chain Lf
- Large ribosomal subunit protein bL32m
- Chain Lr
- Large ribosomal subunit protein mL44
- Chain Ls
- Large ribosomal subunit protein mL45
- Chain Lu
- Large ribosomal subunit protein uL29m
- Chain Ly
- Large ribosomal subunit protein mL51
Coloring options: