IL_8K3O_049

3D structure

PDB id

8K3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.88 Å

Loop

Sequence

GUUGCCAGC*GGGAACUC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K3O|1|A|G|1124
8K3O|1|A|U|1125
8K3O|1|A|U|1126
8K3O|1|A|G|1127
8K3O|1|A|C|1128
8K3O|1|A|C|1129
8K3O|1|A|A|1130
8K3O|1|A|G|1131
8K3O|1|A|C|1132
*
8K3O|1|A|G|1142
8K3O|1|A|G|1143
8K3O|1|A|G|1144
8K3O|1|A|A|1145
8K3O|1|A|A|1146
8K3O|1|A|C|1147
8K3O|1|A|U|1148
8K3O|1|A|C|1149

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10