IL_8K3O_056

3D structure

PDB id

8K3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.88 Å

Loop

Sequence

GGGAUAAC*GCUAAUACC

Length

17 nucleotides

Bulged bases

8K3O|1|A|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K3O|1|A|G|146
8K3O|1|A|G|147
8K3O|1|A|G|148
8K3O|1|A|A|149
8K3O|1|A|U|150
8K3O|1|A|A|151
8K3O|1|A|A|152
8K3O|1|A|C|153
*
8K3O|1|A|G|168
8K3O|1|A|C|169
8K3O|1|A|U|170
8K3O|1|A|A|171
8K3O|1|A|A|172
8K3O|1|A|U|173
8K3O|1|A|A|174
8K3O|1|A|C|175
8K3O|1|A|C|176

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20