IL_8K4E_052

3D structure

PDB id

8K4E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex-II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAGC*GGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K4E|1|A|C|1129
8K4E|1|A|A|1130
8K4E|1|A|G|1131
8K4E|1|A|C|1132
*
8K4E|1|A|G|1142
8K4E|1|A|G|1143
8K4E|1|A|G|1144

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10