IL_8OEQ_017

3D structure

PDB id

8OEQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AUUUU*GGUUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OEQ|1|1|A|445
8OEQ|1|1|U|446
8OEQ|1|1|U|447
8OEQ|1|1|U|448
8OEQ|1|1|U|449
*
8OEQ|1|1|G|480
8OEQ|1|1|G|481
8OEQ|1|1|U|482
8OEQ|1|1|U|483
8OEQ|1|1|U|484

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AF

60S ribosomal protein L32