IL_8OEQ_205

3D structure

PDB id

8OEQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AUCUAGACAGC*GCCGAAU

Length

18 nucleotides

Bulged bases

8OEQ|1|AS|A|1217, 8OEQ|1|AS|G|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OEQ|1|AS|A|1213
8OEQ|1|AS|U|1214
8OEQ|1|AS|C|1215
8OEQ|1|AS|U|1216
8OEQ|1|AS|A|1217
8OEQ|1|AS|G|1218
8OEQ|1|AS|A|1219
8OEQ|1|AS|C|1220
8OEQ|1|AS|A|1221
8OEQ|1|AS|G|1222
8OEQ|1|AS|C|1223
*
8OEQ|1|AS|G|1278
8OEQ|1|AS|C|1279
8OEQ|1|AS|C|1280
8OEQ|1|AS|G|1281
8OEQ|1|AS|A|1282
8OEQ|1|AS|A|1283
8OEQ|1|AS|U|1284

Current chains

Chain AS

25S ribosomal RNA

Nearby chains

Chain BE

60S ribosomal protein L10

Chain BN

60S ribosomal protein L20

Chain CH

60S ribosomal protein L40-B