IL_8OEQ_251

3D structure

PDB id

8OEQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGGAG*UCUA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OEQ|1|AS|U|2424
8OEQ|1|AS|G|2425
8OEQ|1|AS|G|2426
8OEQ|1|AS|A|2427
8OEQ|1|AS|G|2428
*
8OEQ|1|AS|U|2475
8OEQ|1|AS|C|2476
8OEQ|1|AS|U|2477
8OEQ|1|AS|A|2478

Current chains

Chain AS

25S ribosomal RNA

Nearby chains

Chain CD

60S ribosomal protein L36