IL_8OEQ_467

3D structure

PDB id

8OEQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AUACA*UAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OEQ|1|B|A|479
8OEQ|1|B|U|480
8OEQ|1|B|A|481
8OEQ|1|B|C|482
8OEQ|1|B|A|483
*
8OEQ|1|B|U|502
8OEQ|1|B|A|503
8OEQ|1|B|A|504
8OEQ|1|B|U|505

Current chains

Chain B

18S ribosomal RNA

Nearby chains

Chain L

Ribosomal protein S4

Chain g

40S ribosomal protein S30