IL_8OH6_102

3D structure

PDB id

8OH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

GUGUAGAAUAAGUG*CUAC

Length

18 nucleotides

Bulged bases

8OH6|1|1|U|2431, 8OH6|1|1|U|2438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OH6|1|1|G|2430
8OH6|1|1|U|2431
8OH6|1|1|G|2432
8OH6|1|1|U|2433
8OH6|1|1|A|2434
8OH6|1|1|G|2435
8OH6|1|1|A|2436
8OH6|1|1|A|2437
8OH6|1|1|U|2438
8OH6|1|1|A|2439
8OH6|1|1|A|2440
8OH6|1|1|G|2441
8OH6|1|1|U|2442
8OH6|1|1|G|2443
*
8OH6|1|1|C|2470
8OH6|1|1|U|2471
8OH6|1|1|A|2472
8OH6|1|1|C|2473

Current chains

Chain 1

25S (gene name XR_002086444.1)

Nearby chains

Chain l1

Ribosomal protein