IL_8OH6_184
3D structure
- PDB id
- 8OH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- UUU*AUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OH6_184 not in the Motif Atlas
- Homologous match to IL_8C3A_037
- Geometric discrepancy: 0.047
- The information below is about IL_8C3A_037
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8OH6|1|AS|U|950
8OH6|1|AS|U|951
8OH6|1|AS|U|952
*
8OH6|1|AS|A|961
8OH6|1|AS|U|962
8OH6|1|AS|A|963
Current chains
- Chain AS
- 25S (gene name XR_002086444.1)
Nearby chains
- Chain BG
- 60S ribosomal protein L13
- Chain BL
- 60S ribosomal protein L18-A
- Chain BO
- 60S ribosomal protein L21-A
- Chain BV
- 60S ribosomal protein L28
- Chain BW
- 60S ribosomal protein L29
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