IL_8OH6_236

3D structure

PDB id

8OH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OH6|1|AS|C|2182
8OH6|1|AS|U|2183
8OH6|1|AS|G|2184
8OH6|1|AS|A|2185
8OH6|1|AS|A|2186
8OH6|1|AS|U|2187
8OH6|1|AS|G|2188
*
8OH6|1|AS|C|2213
8OH6|1|AS|G|2214
8OH6|1|AS|C|2215
8OH6|1|AS|G|2216

Current chains

Chain AS

25S (gene name XR_002086444.1)

Nearby chains

Chain AW

60S ribosomal protein L2-B

Chain CM

Small subunit ribosomal RNA; SSU rRNA