IL_8OH6_355

3D structure

PDB id

8OH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

CUACUA*UAGAG

Length

11 nucleotides

Bulged bases

8OH6|1|B|U|1325

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OH6|1|B|C|1324
8OH6|1|B|U|1325
8OH6|1|B|A|1326
8OH6|1|B|C|1327
8OH6|1|B|U|1328
8OH6|1|B|A|1329
*
8OH6|1|B|U|1367
8OH6|1|B|A|1368
8OH6|1|B|G|1369
8OH6|1|B|A|1370
8OH6|1|B|G|1371

Current chains

Chain B

18S

Nearby chains

Chain AR

Guanine nucleotide-binding protein subunit beta-like protein

Chain S

40S ribosomal protein S16

Chain T

40S ribosomal protein S17-B

Chain W

Ribosomal protein S10