IL_8OIP_024

3D structure

PDB id

8OIP (explore in PDB, NAKB, or RNA 3D Hub)

Description

28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACAUC*GCCAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIP|1|AA|A|537
8OIP|1|AA|C|538
8OIP|1|AA|A|539
8OIP|1|AA|U|540
8OIP|1|AA|C|541
*
8OIP|1|AA|G|824
8OIP|1|AA|C|825
8OIP|1|AA|C|826
8OIP|1|AA|A|827
8OIP|1|AA|U|828

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

Mitochondrial ribosomal protein S7

Chain AI

mRNA

Chain Ac

Coiled-coil-helix-coiled-coil-helix domain containing 1

Chain Ag

uS9m