IL_8OIP_037

3D structure

PDB id

8OIP (explore in PDB, NAKB, or RNA 3D Hub)

Description

28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CACCC*GACAAG

Length

11 nucleotides

Bulged bases

8OIP|1|AA|A|919

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIP|1|AA|C|851
8OIP|1|AA|A|852
8OIP|1|AA|C|853
8OIP|1|AA|C|854
8OIP|1|AA|C|855
*
8OIP|1|AA|G|915
8OIP|1|AA|A|916
8OIP|1|AA|C|917
8OIP|1|AA|A|918
8OIP|1|AA|A|919
8OIP|1|AA|G|920

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

Aurora kinase A interacting protein 1

Chain AI

mRNA

Chain AJ

Mitochondrial ribosomal protein S12

Chain Aa

Peptide chain release factor 1, mitochondrial