IL_8OIP_049
3D structure
- PDB id
- 8OIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAAAAAAUCACAAU*AAUAAUCC
- Length
- 24 nucleotides
- Bulged bases
- 8OIP|1|AA|A|309, 8OIP|1|AA|A|319, 8OIP|1|AA|U|394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIP|1|AA|G|306
8OIP|1|AA|A|307
8OIP|1|AA|A|308
8OIP|1|AA|A|309
8OIP|1|AA|A|310
8OIP|1|AA|A|311
8OIP|1|AA|A|312
8OIP|1|AA|A|313
8OIP|1|AA|A|314
8OIP|1|AA|U|315
8OIP|1|AA|C|316
8OIP|1|AA|A|317
8OIP|1|AA|C|318
8OIP|1|AA|A|319
8OIP|1|AA|A|320
8OIP|1|AA|U|321
*
8OIP|1|AA|A|389
8OIP|1|AA|A|390
8OIP|1|AA|U|391
8OIP|1|AA|A|392
8OIP|1|AA|A|393
8OIP|1|AA|U|394
8OIP|1|AA|C|395
8OIP|1|AA|C|396
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AE
- bS6m,Mitochondrial ribosomal protein S6
- Chain AJ
- Mitochondrial ribosomal protein S12
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- uS17m
- Chain AP
- Mitochondrial ribosomal protein S18C
- Chain AT
- Mitochondrial ribosomal protein S25
- Chain Ac
- Coiled-coil-helix-coiled-coil-helix domain containing 1
Coloring options: