IL_8OIP_050

3D structure

PDB id

8OIP (explore in PDB, NAKB, or RNA 3D Hub)

Description

28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAAAUUAUA*UAAAAUAAA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIP|1|AA|U|327
8OIP|1|AA|A|328
8OIP|1|AA|A|329
8OIP|1|AA|A|330
8OIP|1|AA|U|331
8OIP|1|AA|U|332
8OIP|1|AA|A|333
8OIP|1|AA|U|334
8OIP|1|AA|A|335
*
8OIP|1|AA|U|359
8OIP|1|AA|A|360
8OIP|1|AA|A|361
8OIP|1|AA|A|362
8OIP|1|AA|A|363
8OIP|1|AA|U|364
8OIP|1|AA|A|365
8OIP|1|AA|A|366
8OIP|1|AA|A|367

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

bS6m,Mitochondrial ribosomal protein S6

Chain AP

Mitochondrial ribosomal protein S18C

Chain AQ

28S ribosomal protein S21, mitochondrial

Chain Ai

Mitochondrial ribosomal protein S11