IL_8OIQ_012
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AAC*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIQ_012 not in the Motif Atlas
- Geometric match to IL_1U9S_007
- Geometric discrepancy: 0.1548
- The information below is about IL_1U9S_007
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
8OIQ|1|B8|A|214
8OIQ|1|B8|A|215
8OIQ|1|B8|C|216
*
8OIQ|1|B8|G|230
8OIQ|1|B8|C|231
8OIQ|1|B8|U|232
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BK
- 39S ribosomal protein L35, mitochondrial
- Chain BN
- Mitochondrial ribosomal protein L4
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain Be
- Mitochondrial ribosomal protein L57
- Chain Bn
- Mitochondrial ribosomal protein L38
- Chain Bx
- 39S ribosomal protein L49, mitochondrial
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