IL_8OIQ_013

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAA*UUUAG

Length

9 nucleotides

Bulged bases

8OIQ|1|B8|U|228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|C|216
8OIQ|1|B8|A|217
8OIQ|1|B8|A|218
8OIQ|1|B8|A|219
*
8OIQ|1|B8|U|226
8OIQ|1|B8|U|227
8OIQ|1|B8|U|228
8OIQ|1|B8|A|229
8OIQ|1|B8|G|230

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BK

39S ribosomal protein L35, mitochondrial

Chain BN

Mitochondrial ribosomal protein L4

Chain BT

39S ribosomal protein L15, mitochondrial

Chain Bn

Mitochondrial ribosomal protein L38

Chain Bx

39S ribosomal protein L49, mitochondrial