IL_8OIQ_025
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 8OIQ|1|B8|A|532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIQ_025 not in the Motif Atlas
- Homologous match to IL_6PRV_002
- Geometric discrepancy: 0.2919
- The information below is about IL_6PRV_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIQ|1|B8|G|531
8OIQ|1|B8|A|532
8OIQ|1|B8|A|533
8OIQ|1|B8|A|534
*
8OIQ|1|B8|U|545
8OIQ|1|B8|C|546
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BQ
- Mitochondrial ribosomal protein L11
- Chain BU
- uL16m
- Chain Bb
- Mitochondrial ribosomal protein L53
- Chain Bc
- mL54
- Chain Bl
- Ribosomal protein
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